Re: [gmx-users] Persistence length calculation using g_polystat

Hello Sir, Thank you very much for a reply. I have selected following atoms P, C5',C4',C3' atoms to estimate persistence length. I want to find persistence length of whole dna, can you please elaborate on , how to calculate persistence length of whole dna using helical axis of the

Re: [gmx-users] Persistence length calculation using g_polystat

Which group of atoms you have taken for the persistence length? g_polystat requires a group of atoms which are consecutively bonded in polymer main-chain. You should take only backbone atoms of one strand of the DNA. But, it does not give the persistence length for the whole DNA. I guess, to estima