Re: [gmx-users] git release-4-5-patches behind proxy

Hi, please try "git pull" (for repo.or.cz) and than redo the checkout. I accidentally deleted the release-4-5-patches branch. But it is back and it should work. If it does not work please run "git branch -r" and post the result. BTW: The error message you get for git.gromacs.org suggests that you

Re: [gmx-users] Git tutorial for gromacs

Alif M Latif wrote: Dear GROMACS users and developers I had a problem calculating 1/viscosity from my energy file. It's been said that the bug have been fixed and the way to get it is through git. I've successfully cloned the gromacs git repo. But I really did not have any experien

Re: [gmx-users] git gromacs

If using links or simply copying in /usr/local/bin I don't mind, but it would easier, at least for me, once installing gromacs from source to be able to have the gmx bins in /usr/local/bin and, of course, be able to uninstall all gromacs as well (and undoing links or removing copies from /usr/local

Re: [gmx-users] git gromacs

On 9/7/10 1:19 PM, Alan wrote: I am trying release-4-5-patches and now I can see it's compiling and installing. However, 'make install' puts the bins only in /usr/local/gromacs/bin and I don't have (or don't find) how to 'make links' or similar to have the gmx bins in /usr/local/bin. I am us

Re: [gmx-users] git gromacs

Thanks Carsten. I am trying release-4-5-patches and now I can see it's compiling and installing. However, 'make install' puts the bins only in /usr/local/gromacs/bin and I don't have (or don't find) how to 'make links' or similar to have the gmx bins in /usr/local/bin. I am using cmake. Thanks,

Re: [gmx-users] git gromacs

Hi Alan, 'bleeding edge' gromacs development is as always in the 'master' branch. The latest bugfixes for the 4.5.x versions you are going to find in the 'release-4-5-patches' branch. Carsten On Sep 7, 2010, at 12:09 PM, Alan wrote: > Hi there, > > Now that gromacs 4.5.1 is released I was won

RE: [gmx-users] git

OMACS users Subject: Re: [gmx-users] git Thanks Justin. I installed git first and then used git clone g...@git.gromacs.org:gromacs.git and this is what I get Initialized empty Git repository in /fs/home/sm868/gromacs/.git/ The authenticity of host 'git.gromacs.org (130.237.163.208)

Re: [gmx-users] git

- Original Message - From: Sai Pooja Date: Friday, June 18, 2010 15:28 Subject: Re: [gmx-users] git To: Discussion list for GROMACS users > Thanks Justin. I installed git first and then used git clone > g...@git.gromacs.org:gromacs.git and this is what I get > Initialized

Re: [gmx-users] git

Thanks Justin. I installed git first and then used git clone g...@git.gromacs.org:gromacs.git and this is what I get Initialized empty Git repository in /fs/home/sm868/gromacs/.git/ The authenticity of host 'git.gromacs.org (130.237.163.208)' can't be established. RSA key fingerprint is ef:9e:30:0

Re: [gmx-users] git

Sai Pooja wrote: Hi, This is the first time I am using git. I tried to get started by using - git clone git://git.gromacs.org/gromacs.git - command but got an error - "command not found: git" (I have tried different versions of this command available w

Re: [gmx-users] git installation error

It looks like you're you're using gcc; is that right? If so, you're probably using an old (pre-2005) version. Try a newer one: it's free! Sander On Mar 30, 2010, at 13:00 , babu gokul wrote: > I tried to install git version of Gromacs but when i make the file its shows > the following error

Re: [gmx-users] GIT

Florian Dommert wrote: * David van der Spoel [2009-07-05 08:36:27 -0400]: Florian Dommert wrote: Hello, on Friday I tried to clone the git repo for the first time, but unfortunately I was not successful and got following error message: # git clone git://gromacs.cbr.su.se/gmx-src.git

Re: [gmx-users] GIT

* David van der Spoel [2009-07-05 08:36:27 -0400]: Florian Dommert wrote: Hello, on Friday I tried to clone the git repo for the first time, but unfortunately I was not successful and got following error message: # git clone git://gromacs.cbr.su.se/gmx-src.git Initialized empty Git

Re: [gmx-users] GIT

Florian Dommert wrote: Hello, on Friday I tried to clone the git repo for the first time, but unfortunately I was not successful and got following error message: # git clone git://gromacs.cbr.su.se/gmx-src.git Initialized empty Git repository in /Users/dommert/icp/develop/gromacs/gmx-