Re: [gmx-users] water mediated hydrogen bond

2012-11-29 Thread Justin Lemkul
On 11/29/12 10:18 AM, Raj wrote: Hi all, I would like to measure the water mediated hydrogen bond between the ligand and the protein. When I searched the forum I could able to get the link (http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/Scripts/plot_hbmap.txt) for the script with whic

[gmx-users] water mediated hydrogen bond

2012-11-29 Thread Raj
Hi all, I would like to measure the water mediated hydrogen bond between the ligand and the protein. When I searched the forum I could able to get the link (http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/Scripts/plot_hbmap.txt) for the script with which we can get the above mentioned obje

[gmx-users] water mediated hydrogen bond

2010-08-09 Thread babu gokul
Dear all I have been looking for water mediated hydrogen bond in my simulation when i use g_hbond the -ins option it dose not showing the water mediated hydrogen bond could you please tell me how to get the hydrogen mediated hydrogen bond in gromacs ? is there any way to calculate hydrogen medi

[gmx-users] water mediated hydrogen bond

2010-08-09 Thread babu gokul
Dear all I have been looking for water mediated hydrogen bond in my simulation when i use g_hbond the -ins option it dose not showing the water mediated hydrogen bond could you please tell me how to get the hydrogen mediated hydrogen bond in gromacs ? is there any way to calculate hydrogen medi

[gmx-users] water Mediated Hydrogen Bond

2010-07-19 Thread babu gokul
Dear all I have been looking for water mediated hydrogen bond in my simulation when i use g_hbond the -ins option it dose not showing the water mediated hydrogen bond could you please tell me how to get the hydrogen mediated hydrogen bond in gromacs ? is there any way to calculate hydrogen medi