Re: [gmx-users] very strange domain composition statistics

2009-08-02 Thread Mark Abraham
4 Finished mdrun on node 0 Thu Jul 30 01:47:05 2009 Quoting Berk Hess : Date: Fri, 31 Jul 2009 07:49:49 +0200 From: sp...@xray.bmc.uu.se To: gmx-users@gromacs.org Subject: Re: [gmx-users] very strange domain composition statistics Mark Abraham wrote: Jennifer Williams wrote:

RE: [gmx-users] very strange domain composition statistics

2009-07-31 Thread Jennifer Williams
i, 31 Jul 2009 07:49:49 +0200 From: sp...@xray.bmc.uu.se To: gmx-users@gromacs.org Subject: Re: [gmx-users] very strange domain composition statistics Mark Abraham wrote: Jennifer Williams wrote: Hi , I am having some problems when running in parallel. Although my jobs run to completion I am ge

RE: [gmx-users] very strange domain composition statistics

2009-07-31 Thread Berk Hess
> Date: Fri, 31 Jul 2009 07:49:49 +0200 > From: sp...@xray.bmc.uu.se > To: gmx-users@gromacs.org > Subject: Re: [gmx-users] very strange domain composition statistics > > Mark Abraham wrote: > > Jennifer Williams wrote: > >> Hi , > >> > >>

Re: [gmx-users] very strange domain composition statistics

2009-07-30 Thread David van der Spoel
Mark Abraham wrote: Jennifer Williams wrote: Hi , I am having some problems when running in parallel. Although my jobs run to completion I am getting some worrying domain decomposition statistics in particular the average load imbalance and the performance loss due to load imbalance see belo

Re: [gmx-users] very strange domain composition statistics

2009-07-30 Thread Mark Abraham
Jennifer Williams wrote: Hi , I am having some problems when running in parallel. Although my jobs run to completion I am getting some worrying domain decomposition statistics in particular the average load imbalance and the performance loss due to load imbalance see below: Please report yo

[gmx-users] very strange domain composition statistics

2009-07-30 Thread Jennifer Williams
Hi , I am having some problems when running in parallel. Although my jobs run to completion I am getting some worrying domain decomposition statistics in particular the average load imbalance and the performance loss due to load imbalance see below: D O M A I N D E C O M P O S I T I O N