Re: [gmx-users] use AMBER ff03 force field in gromacs 4

On Thursday, May 12, 2011 at 9:03 AM"mirc...@sjtu.edu.cn" wrote:   > I am using GROMACS 4 to do MD simulations of protein-ligand complexes.I > encountered some > problems when generating the topology file of the ligands. I generate the > topology file > of ligands by using topolbuild package.

Re: [gmx-users] use AMBER ff03 force field in gromacs 4

mirc...@sjtu.edu.cn wrote: Dear All: I am using GROMACS 4 to do MD simulations of protein-ligand complexes.I encountered some problems when generating the topology file of the ligands. I generate the topology file of ligands by using topolbuild package. The atom types of GAFF force field ar

[gmx-users] use AMBER ff03 force field in gromacs 4

Dear All: I am using GROMACS 4 to do MD simulations of protein-ligand complexes.I encountered some problems when generating the topology file of the ligands. I generate the topology file of ligands by using topolbuild package. The atom types of GAFF force field are assigned to the atoms of

[gmx-users] use AMBER ff03 force field in gromacs 4

Dear All: I am using GROMACS 4 to do MD simulations of protein-ligand complexes.I encountered some problems when generating the topology file of the ligands. I generate the topology file of ligands by using topolbuild package. The atom types of GAFF force field are assigned to the atoms o