Re: [gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Diana Fusco
Great, thanks! I'll give it a try. On 7/8/13 1:02 PM, Justin Lemkul wrote: On 7/8/13 12:58 PM, Justin Lemkul wrote: On 7/8/13 12:56 PM, Diana Fusco wrote: Hi Justin, I have actually followed your tutorial to perform umbrella sampling on CPU and it worked great. Can I use the same file fo

Re: [gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Justin Lemkul
On 7/8/13 12:58 PM, Justin Lemkul wrote: On 7/8/13 12:56 PM, Diana Fusco wrote: Hi Justin, I have actually followed your tutorial to perform umbrella sampling on CPU and it worked great. Can I use the same file for GPU acceleration or I have to add some fields and commands? There's nothi

Re: [gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Justin Lemkul
On 7/8/13 12:56 PM, Diana Fusco wrote: Hi Justin, I have actually followed your tutorial to perform umbrella sampling on CPU and it worked great. Can I use the same file for GPU acceleration or I have to add some fields and commands? There's nothing GPU-specific in the .mdp file. -Justin

Re: [gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Diana Fusco
Hi Justin, I have actually followed your tutorial to perform umbrella sampling on CPU and it worked great. Can I use the same file for GPU acceleration or I have to add some fields and commands? Thanks! Diana On 7/8/13 12:47 PM, Justin Lemkul wrote: On 7/8/13 12:08 PM, Diana Fusco wrote:

Re: [gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Justin Lemkul
On 7/8/13 12:08 PM, Diana Fusco wrote: Hello, I'd like to know if it is possible with Gromacs 4.6 to perform umbrella sampling using GPU with orientational restraints. If it is, can you give me a simple example of mdp file to see how it works? As to whether or not it works, mdrun will compl

[gmx-users] umbrella sampling on GPU with Gromacs 4.6

2013-07-08 Thread Diana Fusco
Hello, I'd like to know if it is possible with Gromacs 4.6 to perform umbrella sampling using GPU with orientational restraints. If it is, can you give me a simple example of mdp file to see how it works? Thanks Diana -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org