Re: [gmx-users] trjconv centre protein

On 3/19/13 7:44 AM, Ewaru wrote: Hi, I know this question has been asked for a few times already but I don't seem to get it. :( I did: 1) editconf -f processed.gro -o newbox.gro -c -d 1.0 -bt dodecahedron 2) genbox -cp newbox.gro -cs spc216.gro -o solv.gro -p topol.top 3) grompp -f ions.mdp -

[gmx-users] trjconv centre protein

Hi, I know this question has been asked for a few times already but I don't seem to get it. :( I did: 1) editconf -f processed.gro -o newbox.gro -c -d 1.0 -bt dodecahedron 2) genbox -cp newbox.gro -cs spc216.gro -o solv.gro -p topol.top 3) grompp -f ions.mdp -c solv.gro -p topol.top -o ions.tpr