Re: [gmx-users] trjconv -pbc nojump -center rect => does not work

2009-06-19 Thread Justin A. Lemkul
Chih-Ying Lin wrote: Hi I have a protein+several ligand in the simulation box. After 5ns, the protein drift to the right edge of the box and the ligand drift to the left edge of the box. I am very sure that the ligand has attached to the protein. with this command => trjconv -pbc nojum

[gmx-users] trjconv -pbc nojump -center rect => does not work

2009-06-19 Thread Chih-Ying Lin
Hi I have a protein+several ligand in the simulation box. After 5ns, the protein drift to the right edge of the box and the ligand drift to the left edge of the box. I am very sure that the ligand has attached to the protein. with this command => trjconv -pbc nojump -center rect so, ho