Francesco Pietra wrote:
Hi Justin:
Could you please indicate the location of such scripts?
They're on the MARTINI website, but given the further description of your
system, they won't solve your problem. What I was referring to were scripts to
build protein topologies. They won't help in
Hi Justin:
Could you please indicate the location of such scripts?
I have no trouble (in generating the .tpr file) with protein partly
embedded in a double layer, by counting graphically the lipid residues
and W residues remaining after creating the hole for the protein pore
region.
My trouble is
Francesco Pietra wrote:
Hi:
As I meet recurring problems in coarse-grained of the top file not
matching the number of coordinates in coordinate file, is there any
way to get the top file automatically like in all-atoms? Editing the
top file to this regard proved difficult in my hands.
I'm a
Hi:
As I meet recurring problems in coarse-grained of the top file not
matching the number of coordinates in coordinate file, is there any
way to get the top file automatically like in all-atoms? Editing the
top file to this regard proved difficult in my hands.
thanks
francesco pietra
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