Re: [gmx-users] time evaluation of dimensions of the simulation cell

2013-10-09 Thread Justin Lemkul
On 10/9/13 9:09 AM, Atila Petrosian wrote: Dear gromacs usres I am doing simulation of lipid bilayer. I did 2 steps: 1) energy minimization, 2) equilibration. Before production run, I want to monitor dimensions of the simulation cell to test the stability of the simulation. On the other han

Re: [gmx-users] time evaluation of dimensions of the simulation cell

2013-10-09 Thread Baptiste Demoulin
Hi, you can use g_energy, and then select X-box and Y-box in the prompt. Bests, Baptiste 2013/10/9 Atila Petrosian > Dear gromacs usres > > I am doing simulation of lipid bilayer. > > I did 2 steps: 1) energy minimization, 2) equilibration. > > Before production run, I want to monitor dimens

[gmx-users] time evaluation of dimensions of the simulation cell

2013-10-09 Thread Atila Petrosian
Dear gromacs usres I am doing simulation of lipid bilayer. I did 2 steps: 1) energy minimization, 2) equilibration. Before production run, I want to monitor dimensions of the simulation cell to test the stability of the simulation. On the other hands, I want to plot dimensions of the simulation