Re: [gmx-users] Starting a simulation of a peptide lipid bilayer

> Dear all > > I am sorry...but i tried all suggestions to start the run of the lipid > bilayre...but failed. > > i looked into the mailing list and found some options. one of the mail > said to remove the 1 from the [defaults] 1 1, column in the > lipid.itp, but as i do say it gives an err

Re: [gmx-users] Starting a simulation of a peptide lipid bilayer

Hi Nur, If you'd searched for "defaults directive" and included my name ;) you'd found: http://www.gromacs.org/pipermail/gmx-users/2007-March/026109.html http://www.gromacs.org/pipermail/gmx-users/2006-February/019673.html By the way, it's ffgmx not ffgnx/ffgnv. Cheers, Tsjerk On 4/26/07, nu

[gmx-users] Starting a simulation of a peptide lipid bilayer

Dear all I am sorry...but i tried all suggestions to start the run of the lipid bilayre...but failed. i looked into the mailing list and found some options. one of the mail said to remove the 1 from the [defaults] 1 1, column in the lipid.itp, but as i do say it gives an error sa

Re: [gmx-users] starting a simulation of a peptide lipid bilayer

Hi Nur, This exact same question has crossed the mailing list several times. Check the archives. Tsjerk On 4/25/07, nur avneet <[EMAIL PROTECTED]> wrote: Dear All I got the lipid topology files from http://moose.bio.ucalgary.ca/. and it also gives the lipid.itp file. When i include both the li

[gmx-users] starting a simulation of a peptide lipid bilayer

Dear All I got the lipid topology files from http://moose.bio.ucalgary.ca/. and it also gives the lipid.itp file. When i include both the lipid and my required dppc.itp file in the topology file...it gives an error saying;"Invalid order for directive atomtypes, file "lipid.itp", line 9...wh