Re: [gmx-users] Simulation of two peptides

nur avneet wrote: Dear all When we simulate two or more peptides/structures together, does gromacs select the best possible orientations of the structures. GROMACS does molecular dynamics, not docking. Mark ___ gmx-users mailing listgmx-users@gr

[gmx-users] Simulation of two peptides

Dear all When we simulate two or more peptides/structures together, does gromacs select the best possible orientations of the structures. Regards nur - Find out what India is talking about on - Yahoo! Answers India Sen

Re: [gmx-users] simulation of two peptides

Owen, Michael wrote: Hello, What are the necessary steps to set up and run a simulation of two peptides? It'll be the same... set up your topologies (suggest one molecule in each of two .itp files) #include them in the .top file, pick a starting configuration for both of them in the same st

[gmx-users] simulation of two peptides

Hello, What are the necessary steps to set up and run a simulation of two peptides? Thank you in advance, Michael Owen ___ gmx-users mailing listgmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscrib