Re: [gmx-users] shuffle switch

2009-08-17 Thread Justin A. Lemkul
Paymon Pirzadeh wrote: Hello, I have a quick question about "-shuffle" switch in grompp. Do we still need to apply this option in 4.0.5 when we use parallel versions or not. There is no such option in 4.0.5. What's more, domain decomposition speeds up the calculations more than shuffling e

[gmx-users] shuffle switch

2009-08-17 Thread Paymon Pirzadeh
Hello, I have a quick question about "-shuffle" switch in grompp. Do we still need to apply this option in 4.0.5 when we use parallel versions or not. regards, Payman ___ gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/