Re: [gmx-users] several questions about g_hbond -contact

2012-02-21 Thread Justin A. Lemkul
Anna Marabotti wrote: Dear users, I'm using g_hbond with option -contact in order to find the contacts between my protein and a series of ligands, in a radius of 0.5 nm. I made several calculations but I'm quite uncertain about the results, therefore I'm asking you some questions. The comm

[gmx-users] several questions about g_hbond -contact

2012-02-21 Thread Anna Marabotti
Dear users, I'm using g_hbond with option -contact in order to find the contacts between my protein and a series of ligands, in a radius of 0.5 nm. I made several calculations but I'm quite uncertain about the results, therefore I'm asking you some questions. The command I used is: g_hbond -f my_