Re: [gmx-users] re: need help with free energy of solvation calculation

2006-06-19 Thread David Mobley
Jonathan, First, a question: I know that certain values of sc-alpha are preferred for different cases, but are there any values that definitely should not be used? In my calculations, some hydrogens (with charges but no L-J) are mutated into united atom methyls (with charges and L-J), so the

[gmx-users] re: need help with free energy of solvation calculation

2006-06-16 Thread Moore, Jonathan (J)
This is a follow-up from my post in January regarding my attempts to reproduce some free energy of solvation calculations for modified cellulose oligomers. First, a question: I know that certain values of sc-alpha are preferred for different cases, but are there any values that definitely shoul