Re: [gmx-users] protein stability as a dimer

2010-07-01 Thread Justin A. Lemkul
other more sensitive properties maybe not. What does the literature tell you about the length of similar systems? -Justin Thanks a lot. -- Sonali Dhindwal --- On *Thu, 1/7/10, Justin A. Lemkul //* wrote: From: Justin A. Lemkul Subject: Re: [gmx-users] protein stability as a dimer

Re: [gmx-users] protein stability as a dimer

2010-07-01 Thread sonali dhindwal
anks a lot. -- Sonali Dhindwal --- On Thu, 1/7/10, Justin A. Lemkul wrote: From: Justin A. Lemkul Subject: Re: [gmx-users] protein stability as a dimer To: "Discussion list for GROMACS users" Date: Thursday, 1 July, 2010, 5:17 PM sonali dhindwal wrote: > Hello All, > I have

Re: [gmx-users] protein stability as a dimer

2010-07-01 Thread Justin A. Lemkul
sonali dhindwal wrote: Hello All, I have done simulation for 1ns on a protein dimer using GROMOS96 43a1 force field. I want to study if the protein is stable as a dimer or not, so can you please give me some suggestion as to what analysis I could do for the same. I checked g_rms after the s

[gmx-users] protein stability as a dimer

2010-06-30 Thread sonali dhindwal
Hello All, I have done simulation for 1ns on a protein dimer using GROMOS96 43a1 force field. I want to study if the protein is stable as  a dimer or not, so can you please give me some suggestion as to what analysis  I could do for the same. I checked g_rms after the simulation, graph which I am