Re: [gmx-users] problems compiling gromacs 4.0.5 in Ubuntu 9.0.4

2009-11-23 Thread Yasuyuki Araki
Dear pedro alberto valiente flores and gmx-users Your situation seems quite similar to my old report on Tue Sep 8, [gmx-users] Using gromacs 4.0.5 built with FORTIFY_SOURCE feature. After that, I had a chance to report and solve this problem by a kind help of gentoo linux bugzilla. Please see htt

Re: [gmx-users] problems compiling gromacs 4.0.5 in Ubuntu 9.0.4

2009-11-20 Thread Mark Abraham
pedro alberto valiente flores wrote: Hi: I ' am trying to compile gromacs 4.0.5 in Ubuntu 9.0.4 I use the following command line in the configure script ./configure --enable-mpi --program-suffix=_405_mpi --prefix= $HOME/software/gmx405 MPICC=$HOME/software/openmpi-1.2.8/bin/mpicc CPPFLAGS="-I$HO

[gmx-users] problems compiling gromacs 4.0.5 in Ubuntu 9.0.4

2009-11-20 Thread pedro alberto valiente flores
Hi: I ' am trying to compile gromacs 4.0.5 in Ubuntu 9.0.4 I use the following command line in the configure script ./configure --enable-mpi --program-suffix=_405_mpi --prefix= $HOME/software/gmx405 MPICC=$HOME/software/openmpi-1.2.8/bin/mpicc CPPFLAGS="-I$HOME/software/openmpi-1.2.8/include/ -I$