Re: [gmx-users] problem obtaining similar force fields for protein and ligand

2011-11-18 Thread Mark Abraham
On 18/11/2011 6:54 PM, swati patel wrote: Hello Users, I am facing a problem in obtaining topologies for my ligand.I tried working on acpype,bt it seems very complex to me.PRODRG is easy but it uses gromos87 force field.PRODRG 2.5 is still not available for download. can anyone suggest me ho

[gmx-users] problem obtaining similar force fields for protein and ligand

2011-11-17 Thread swati patel
Hello Users, I am facing a problem in obtaining topologies for my ligand.I tried working on acpype,bt it seems very complex to me.PRODRG is easy but it uses gromos87 force field.PRODRG 2.5 is still not available for download. can anyone suggest me how to obtain topologies for my protein and ligan