Re: [gmx-users] pressure scaling and hard drive space

2006-02-27 Thread Mark Abraham
Brian Stephenson wrote: I have played around with tau_p, even increasing it to very high values such as 100 and still get the pressure scaling problems. I've also energy minimized many times, to no avail. For this particular system I've been thinking there isn't anything very unphysical going

Re: [gmx-users] pressure scaling and hard drive space

2006-02-27 Thread David van der Spoel
ile. Any ideas on either getting around this period of instability or turning off the pressure scaling errors? Thanks, -Brian Message: 4 Date: Sat, 25 Feb 2006 09:48:00 +0100 From: David van der Spoel <[EMAIL PROTECTED]> Subject: Re: [gmx-users] pressure scaling and hard drive spac

Re: Re: [gmx-users] pressure scaling and hard drive space

2006-02-27 Thread Brian Stephenson
ng errors? Thanks, -Brian Message: 4 Date: Sat, 25 Feb 2006 09:48:00 +0100 From: David van der Spoel <[EMAIL PROTECTED]> Subject: Re: [gmx-users] pressure scaling and hard drive space To: Discussion list for GROMACS users Message-ID: <[EMAIL PROTECTED]> Content-Type: text/plain; chars

Re: [gmx-users] pressure scaling and hard drive space

2006-02-25 Thread paloureiro
Hi Brian, if you are using Berendsen pressure coupling (and your system is in the equilibration phase) try increasing tau-p. Regards. Pedro. Anyone know how to turn off those pesky "pressure scaling is greater than 1%" error messages? Instead of crashing, my simulations keep running with e

Re: [gmx-users] pressure scaling and hard drive space

2006-02-25 Thread David van der Spoel
Brian Stephenson wrote: Anyone know how to turn off those pesky "pressure scaling is greater than 1%" error messages? Instead of crashing, my simulations keep running with errors and I keep running out of hard drive space when the simulation keeps sending out the warnings over and over again.

[gmx-users] pressure scaling and hard drive space

2006-02-24 Thread Brian Stephenson
Anyone know how to turn off those pesky "pressure scaling is greater than 1%" error messages? Instead of crashing, my simulations keep running with errors and I keep running out of hard drive space when the simulation keeps sending out the warnings over and over again. I'm using mdrun with th