Well ... the answer is yes: pairs interactions are scaled by
if epsilon different than 1.0 is defined in the mdp file ...
but easier to fix that the shift/switch thingy ...
Another point (more scary) is that using fudge LJ = 0.0 does not turn
off the pairs LJ interactions; fudge QQ does for elec
Dears,
One questions about pair interaction. I mean the one defined in the
topology files under the [ pairs ].
They interaction with plain electrostatic, meaning without shift, switch
function applied to it. If it was possible to change this, it would be
pretty nice, unless there are specific u
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