Re: [gmx-users] mdrun no error, but hangs no results

2013-07-17 Thread Mark Abraham
Perhaps you need a less prehistoric compiler. Or the affinity-setting bug fix in 4.6.3. Or both. On Jul 17, 2013 6:25 PM, "Shi, Yu (shiy4)" wrote: > Dear gmx-users, > > My problem is weird. > My mdrun worked well using the old serial version 4.5.5 (about two years > ago). And I have these top, n

[gmx-users] mdrun no error, but hangs no results

2013-07-17 Thread Shi, Yu (shiy4)
Dear gmx-users, My problem is weird. My mdrun worked well using the old serial version 4.5.5 (about two years ago). And I have these top, ndx, mdp, and gro files. Basing on those old files, for the serial 4.6.2, the grompp works through, resulting the .tpr file successfully. After that when I m