Re: [gmx-users] grompp error for CNT simulation

2011-12-03 Thread Justin A. Lemkul
niaz poorgholami wrote: Dear gmx users, I am using gromacs 4.5.3 to simulate CNT in water. up to now I have done these things: 1. I used packmol to create my PDB file and the used editconf to change PDB to gro file. 2. I copied oplsaa.ff folder in my working directory 3. I added following l

[gmx-users] grompp error for CNT simulation

2011-12-02 Thread niaz poorgholami
Dear gmx users, I am using gromacs 4.5.3 to simulate CNT in water. up to now I have done these things: 1. I used packmol to create my PDB file and the used editconf to change PDB to gro file. 2. I copied oplsaa.ff folder in my working directory 3. I added following lines to atomname2type.n2t C