Re: [gmx-users] glibc error

2012-12-11 Thread Mark Abraham
We don't yet have enough information to help you. What GROMACS version? Does it happen under other conditions? Mark On Tue, Dec 11, 2012 at 9:06 AM, vahid garshasbi wrote: > hi > when I run g_density in X AND Y direction in my program I have this error: > *** glibc detected *** g_density: munmap

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-19 Thread Arun kumar
Dear David, I will check the reproducibility of the result once again. And then I will submit the bugzilla with all inputs I used for these simulations. Regards, Arun On 5/19/07, David van der Spoel <[EMAIL PROTECTED]> wrote: Arun kumar wrote: > Dear David, > My gcc compiler ve

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-19 Thread David van der Spoel
Arun kumar wrote: Dear David, My gcc compiler version is 4.0.1. Is there any problem with this version?? On 5/18/07, David van der Spoel <[EMAIL PROTECTED]> wrote: Arun kumar wrote: > Hai Mark.. > Thanks for your suggestions. I will think about my > problem clearl

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-18 Thread Arun kumar
Dear David, My gcc compiler version is 4.0.1. Is there any problem with this version?? On 5/18/07, David van der Spoel <[EMAIL PROTECTED]> wrote: Arun kumar wrote: > Hai Mark.. > Thanks for your suggestions. I will think about my > problem clearly and will post a m

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-18 Thread David van der Spoel
Arun kumar wrote: Hai Mark.. Thanks for your suggestions. I will think about my problem clearly and will post a message with much care so that every one can easily read. Also I can get a response. About g_density I will check once again the log file and post the reply

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-18 Thread Arun kumar
Hai Mark.. Thanks for your suggestions. I will think about my problem clearly and will post a message with much care so that every one can easily read. Also I can get a response. About g_density I will check once again the log file and post the reply here. But I think t

Re: [gmx-users] glibc error with g_density (only for some cases)

2007-05-17 Thread Mark Abraham
Arun kumar wrote: Dear gmx-users, I want to discuss and understand about an error I am getting only at times I am simulating a DPPC double bilayer phase(got the coordinates from Dr Tieleman's website). I used genbox -cs to get double bilayer. Then i started simulations

[gmx-users] glibc error with g_density (only for some cases)

2007-05-17 Thread Arun kumar
Dear gmx-users, I want to discuss and understand about an error I am getting only at times I am simulating a DPPC double bilayer phase(got the coordinates from Dr Tieleman's website). I used genbox -cs to get double bilayer. Then i started simulations normally. When I

[gmx-users] Glibc error in Make_edi module

2006-10-08 Thread Guo Zhi
I am trying the flooding method in gromacs package, using a 57 atom system, Met-enkephalin. Following the steps in J. Comp. Chem. by Oliver F.Lange et al. The problem now I have is in Make_edi procedure:   [EMAIL PROTECTED]:~/Met_enkephalin/flood/nm/back_result$ make_edi -f eigenvec.trr -eig eigenv