Re: [gmx-users] generation of acetic acid protonated .itp file

Sunita Patel wrote: Dear gmx-users, I am trying to build acetic acid protonated form using PRODRG to run a simulation using GROMOS96 forcefield. The information says it can only build acetate ion but not the protonated form of acetic acid. How can I build acetic acid (protonated form) .itp

[gmx-users] generation of acetic acid protonated .itp file

Dear gmx-users, I am trying to build acetic acid protonated form using PRODRG to run a simulation using GROMOS96 forcefield. The information says it can only build acetate ion but not the protonated form of acetic acid. How can I build acetic acid (protonated form) .itp file compatible to GROMOS