[gmx-users] g_rdf -xy

2009-05-18 Thread Hongyan Xiao
Dear Berk, I am sorry that I have a mistake in the first letter. In fact I used -bin 0.05, not 100. Yet the result is hanged. Maybe as you said, the current Gromacs can not realize what I want to do. Thanks again! H.Y. Xiao ___ gmx-users mailing

RE: [gmx-users] g_rdf -xy

2009-05-18 Thread Berk Hess
omacs tools which can easily do what you want. Berk Date: Mon, 18 May 2009 16:12:16 +0800 From: hyx...@mail.ipc.ac.cn To: gmx-users@gromacs.org Subject: [gmx-users] g_rdf -xy Dear gmx-users, I simulate a vapor/water/decane/vapor interface system. The interface is xy plane. I want to analysis

[gmx-users] g_rdf -xy

2009-05-18 Thread Hongyan Xiao
Dear gmx-users, I simulate a vapor/water/decane/vapor interface system. The interface is xy plane. I want to analysis water structure at the interface using g_rdf program along z axis with -xy parameter. But the calculation is hanged as the following: Select a reference group and 1 group Group