Re: [gmx-users] g_mindist doubt

2011-09-22 Thread aiswarya pawar
Hi Tsjerk, i used the command in format- g_mindist -f md.xtc -s md.tpr -n 13.ndx -od 13.xvg -on 13.xvg -o 13.out -b 500 -e 1500 -d 0.5 so here i obtain the output- atmpair.out- 0.00e+0013 21161 1.00e+0013 21161 2.00e+0013

Re: [gmx-users] g_mindist doubt

2011-09-21 Thread Mark Abraham
On 22/09/2011 4:43 PM, Tsjerk Wassenaar wrote: Hi Aiswarya, What did you do, what did you get, what did you expect and what is your hunch regarding the difference between your result and your expectation? And have you checked out g_mindist -h? Mark Tsjerk On Thu, Sep 22, 2011 at 8:21 AM,

Re: [gmx-users] g_mindist doubt

2011-09-21 Thread Tsjerk Wassenaar
Hi Aiswarya, What did you do, what did you get, what did you expect and what is your hunch regarding the difference between your result and your expectation? Tsjerk On Thu, Sep 22, 2011 at 8:21 AM, aiswarya pawar wrote: > Hi users, > > The g_mindist gives the minimum distance between the atoms

[gmx-users] g_mindist doubt

2011-09-21 Thread aiswarya pawar
Hi users, The g_mindist gives the minimum distance between the atoms other than the actual distance. Thanks -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search bef