Re: [gmx-users] g_mindist clarification

2011-01-28 Thread Justin A. Lemkul
Chandan Choudhury wrote: Hi all !! Can some one clarify me what the g_mindist does. As far as I understood, it takes two inputs from the index file. If I have more than one entry in both of the indexes than how would g_mindist function? g_mindist finds the minimum distance between any two

[gmx-users] g_mindist clarification

2011-01-27 Thread Chandan Choudhury
Hi all !! Can some one clarify me what the g_mindist does. As far as I understood, it takes two inputs from the index file. If I have more than one entry in both of the indexes than how would g_mindist function? eg; echo "7 8" | g_mindist -s ../md30-60.tpr -n index.ndx -f ../30-60.part0004.trr