Re: [gmx-users] error says "segnentation fault"

2006-11-14 Thread Tsjerk Wassenaar
Hi, It is more likely that due to some very large forces mdrun tries to 'move a particle' to some region of the memory it doesn't have access to. I'd say the system is wrong. You may have overlapping particles or something alike. Check your system: the topology, the structure, the box. You did pe

Re: [gmx-users] error says "segnentation fault"

2006-11-13 Thread Mark Abraham
nur avneet wrote: Dear All everytime i give the command mdrun...the terminal stops after some steps and says segmentation fault Something is catastrophically broken. This would happen if you attempted to move a gromacs installation, messed with some system libraries, or possibly moved a bin

[gmx-users] error says "segnentation fault"

2006-11-13 Thread nur avneet
Dear All everytime i give the command mdrun...the terminal stops after some steps and says segmentation fault regards nur Find out what India is talking about on - Yahoo! Answers India Send FREE SMS to your friend's mobile from Yahoo! Messenger Version 8. Get it NOW