Re: [gmx-users] energy decreasing in NVE simulation

2010-05-19 Thread Erik Marklund
For more exotic NVE-systems I had to do some or several of the following things to get stable Etot: * have an even shorter timestep than one would expect from the applied constraints and such. * use double precision. * apply the constraints with lower tolerance/more iterations etc. Then there's

[gmx-users] energy decreasing in NVE simulation

2010-05-19 Thread Yun-an Yan
Dear all, When I try to simulation with NVE ensemble, the total energy keeps decreasing. Geometry optimization and solvent equilibration are done before the NVE simulation. I follow the requirements provided in http://www.gromacs.org/Documentation/Terminology/NVE Would any one help me to figur