On 23/02/2011 3:35 PM, Justin Kat wrote:
Im not quite sure if this is the right place to analyze, but a bit before the part in the
config.log where it states the error of "cannot compuete sizeof (off_t)", there
is this:
configure:25048: checking size of off_t
configure:25053: /usr/local/bin/
Im not quite sure if this is the right place to analyze, but a bit
before the part in the config.log where it states the error of "cannot
compuete sizeof (off_t)", there is this:
configure:25048: checking size of off_t
configure:25053: /usr/local/bin/mpicc -o conftest -O3 -fomit-frame-pointer -f
On Feb 20, 2011, at 9:30 PM, Justin Kat wrote:
> Dear experts,
>
> I am still unable to overcome this error during the configuration:
>
> configure: error: cannot compute sizeof (off_t)
> See `config.log' for more details.
So what does config.log say about "cannot compute sizeof (off_t) ?"
Car
Dear experts,
I am still unable to overcome this error during the configuration:
configure: error: cannot compute sizeof (off_t)
See `config.log' for more details.
I came across this thread with the exact same setup as I have:
http://lists.gromacs.org/pipermail/gmx-users/2011-February/058369.h
On 19/02/2011 2:32 PM, Justin Kat wrote:
Dear experts,
I have installed Gromacs under the normal configuration and am now
attempting to install the mpi version of mdrun on a machine, however I
am getting this error during the configuration:
configure: error: cannot compute sizeof (off_t)
See
Dear experts,
I have installed Gromacs under the normal configuration and am now
attempting to install the mpi version of mdrun on a machine, however I am
getting this error during the configuration:
configure: error: cannot compute sizeof (off_t)
See `config.log' for more details.
I cant seem t
On 8/02/2011 12:58 AM, vferra...@units.it wrote:
Dear all,
I'm trying to install gromacs 4.5.3, I've succesfully installed fftw
3.3.2 and openmpi 1.4.3
When I try to configure gromacs with
./configure --with-fft=fftw3 --enable-shared --enable-mpi
the shell reply me with this error:
configur
Dear all,
I'm trying to install gromacs 4.5.3, I've succesfully installed fftw
3.3.2 and openmpi 1.4.3
When I try to configure gromacs with
./configure --with-fft=fftw3 --enable-shared --enable-mpi
the shell reply me with this error:
configure: error: cannot compute sizeof (off_t)
See `conf
On 7/05/2010 11:59 PM, Emily Curtis wrote:
Hi Lina,
Did you ever figure out why you were getting the message:
gromacs checking size of void*... configure: error: cannot compute
sizeof (void*)
I am also getting this error. I have read the configure.log a million
times and I still can't figure o
Hi Lina,
Did you ever figure out why you were getting the message:
gromacs checking size of void*... configure: error: cannot compute
sizeof (void*)
I am also getting this error. I have read the configure.log a million times
and I still can't figure out why I am getting this message. The stran
On 29/03/2010 12:59 AM, lina wrote:
Hello everyone,
I tried to install gromacs on another cluster, after this,
./configure \
--enable-shared \
--enable-single \
--enable-mpi \
--program-suffix=_mpi \
--enable-gsl
there is a problem showing like this:
gr
Hello everyone,
I tried to install gromacs on another cluster, after this,
./configure \
--enable-shared \
--enable-single \
--enable-mpi \
--program-suffix=_mpi \
--enable-gsl
there is a problem showing like this:
gromacs checking size of void*... conf
Andreas Kring wrote:
Hi all.
I have tried to search the mailing archives and the FAQ, but I could not
find an answer, so here goes...
This is not surprising, since your problem is with configuring LAM, not
GROMACS. Actually, the reason for your problem not dependent on the
software you're t
Hi all.
I have tried to search the mailing archives and the FAQ, but I could not
find an answer, so here goes...
I'm using Ubuntu 7.10 and the latest gcc compiler in this distro is
gcc-4.1.2. Being aware of the warning that the gcc-4.1.x compilers are
broken, I installed gcc-4.3.0 using the
Hi,
On Apr 12, 2006, at 9:41 AM, Florian Haberl wrote:
Does anyone have a clue from what this error is and how it can be
fixed?
Update your gromacs version to 3.3.1
configure: error: conditional "am__fastdepCXX" was never defined
Perhaps you have to update your system too, automake and
hi
On Wednesday 12 April 2006 01:06, Vanessa Oklejas wrote:
> Hi everybody,
>
> I've been trying to compile gromacs-3.1.4 onto a linux server with
> Red Hat v 7.3 OS. I was able to compile the fftw library without
> incident, but when I issue the configure command (>./configure
> --prefix=/home/v
Hi everybody,
I've been trying to compile gromacs-3.1.4 onto a linux server with
Red Hat v 7.3 OS. I was able to compile the fftw library without
incident, but when I issue the configure command (>./configure
--prefix=/home/voklejas/gromacs) in the gromacs-3.1.4 directory I get
the following
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