cs.org [mailto:gmx-users-
> boun...@gromacs.org] On Behalf Of Justin A. Lemkul
> Sent: Tuesday, 22 March 2011 1:43 AM
> To: Discussion list for GROMACS users
> Subject: Re: [gmx-users] compressing in presence of voids
>
>
>
> Moeed wrote:
> > Hello,
> >
> >
Moeed wrote:
Hello,
I am compressing a single extended PE chain (16 nm in length) in a box
of 20nm in vacuo to get a more realistic shape of the polymer. Although
system is small (only 362 atoms), whatever -np # I choose simulation
runs very slowly. Is that because of the presence of voids
Hello,
I am compressing a single extended PE chain (16 nm in length) in a box of
20nm in vacuo to get a more realistic shape of the polymer. Although system
is small (only 362 atoms), whatever -np # I choose simulation runs very
slowly. Is that because of the presence of voids? Is there a way to
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