ent: Saturday, 16 February 2013, 13:19
Subject: Re: [gmx-users] calculate the size of protein
Hi KT,
If you set a box in any way, editconf writes the size of the box in
the input file, the dimensions of the system and the size of the
resulting box.
Cheers,
Tsjerk
On Sat, Feb 16, 2013 at 10:42 AM, K
Hi KT,
If you set a box in any way, editconf writes the size of the box in
the input file, the dimensions of the system and the size of the
resulting box.
Cheers,
Tsjerk
On Sat, Feb 16, 2013 at 10:42 AM, Kieu Thu Nguyen wrote:
> Hi,
>
> What is the specific editconf command should i use to cal
Hi,
What is the specific editconf command should i use to calculate the
dimensions of fitting box of the protein ?
Thanks and regards,
KT
On Fri, Feb 8, 2013 at 2:03 PM, Kieu Thu Nguyen wrote:
> Thank Tsjerk ! I mean that i want to determine the dimensions (x, y, z) of
> the protein
>
>
> On F
Thank Tsjerk ! I mean that i want to determine the dimensions (x, y, z) of
the protein
On Fri, Feb 8, 2013 at 1:48 PM, Tsjerk Wassenaar wrote:
> Hi KT,
>
> What do you mean with size?
>
> - circumscribed radius: editconf
> - radius of gyration: g_gyrate
> - dimensions of fitting box: editconf
>
Hi KT,
What do you mean with size?
- circumscribed radius: editconf
- radius of gyration: g_gyrate
- dimensions of fitting box: editconf
- volume: g_sas
Cheers,
Tsjerk
On Fri, Feb 8, 2013 at 5:55 AM, Kieu Thu Nguyen wrote:
> Dear all,
>
> I want to calculate the size of the protein. Which too
Dear all,
I want to calculate the size of the protein. Which tool should i use for
this purpose ?
Thanks and regards,
KT
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