Re: [gmx-users] Using g_select to detect water pores in a bilayer

Hi On Thu, Jan 27, 2011 at 16:18, Manuel Nuno Melo wrote: > My idea is to count the number of water molecules within a certain z > distance of the bilayer center, and flag a pore above a certain threshold. > The problem is that the position of this z-slab cannot be hardcoded because > my simulati

[gmx-users] Using g_select to detect water pores in a bilayer

Hello, I have a coarse-grain lipid bilayer system with a pore-forming peptide. I am trying to use g_select to automate the detection of the opening of a water pore. My idea is to count the number of water molecules within a certain z distance of the bilayer center, and flag a pore above a certain