Re: [gmx-users] Truncation of file traj.trr failed

ram bio wrote: Dear justin, The job was terminated as under: vol 0.92 imb F 1% step 5860300, will finish Sun Nov 15 06:56:32 2009 =>> PBS: job killed: walltime 86438 exceeded limit 86400 mpiexec: killing job... i think due to queueing system and maximum time being 24hrs. i donot know how

Re: [gmx-users] Truncation of file traj.trr failed

Dear justin, The job was terminated as under: vol 0.92 imb F 1% step 5860300, will finish Sun Nov 15 06:56:32 2009 =>> PBS: job killed: walltime 86438 exceeded limit 86400 mpiexec: killing job... i think due to queueing system and maximum time being 24hrs. i donot know how to know whether new

Re: [gmx-users] Truncation of file traj.trr failed

ram bio wrote: Dear Justin, As per the suggestions in the bug, i changed the line in src/gmxlib/checkpoint.c file on the cluster: from outputfiles[i].offset = ( ((off_t) offset_high) << 32 )| ( (off_t) offset_low ); to outputfiles[i].offset = ( ((off_t) offset_high) << 32 )| ( (off_t) offset

Re: [gmx-users] Truncation of file traj.trr failed

Dear Justin, As per the suggestions in the bug, i changed the line in src/gmxlib/checkpoint.c file on the cluster: from outputfiles[i].offset = ( ((off_t) offset_high) << 32 )| ( (off_t) offset_low ); to outputfiles[i].offset = ( ((off_t) offset_high) << 32 )| ( (off_t) offset_low & mask ); and