Re: [gmx-users] Testing the performance of

Thanks! Mark. I got solution to my problem. For my system, setting pinoffset = 0, 16 and pinstride = 1 for two simultaneous simulations gave much satisfactory performance both for Verlet and Group cutoff-scheme. I tried it for 4 simultaneous simulations also with pinoffset = 0, 8, 16, 24 and pinst

Re: [gmx-users] Testing the performance of

On Wed, Jul 3, 2013 at 10:17 AM, Richa Singh wrote: > Hello, > > I want some inputs on observed performance of protein-in-water > simulations run on a single server with 2 Intel Xeon E5-2660 > processors. Each processor has 8C/16T, so total 16C/32T. My system is > composed of 1643 beta-microglobul

[gmx-users] Testing the performance of

Hello, I want some inputs on observed performance of protein-in-water simulations run on a single server with 2 Intel Xeon E5-2660 processors. Each processor has 8C/16T, so total 16C/32T. My system is composed of 1643 beta-microglobulin atoms and 24699 water atoms. I ran several 500ps simulation