Re: [gmx-users] Slicing .gro file geometry

2011-08-18 Thread Mark Abraham
On 19/08/2011 12:43 AM, shikha nangia wrote: Dear all: I would like to create a smaller simulation box (from a larger simulation box in .gro file) by removing atoms in the x, y and z-directions and saving the subset system into a new .gro file (smaller box and subset of molecules) For examp

[gmx-users] Slicing .gro file geometry

2011-08-18 Thread shikha nangia
Dear all: I would like to create a smaller simulation box (from a larger simulation box in .gro file) by removing atoms in the x, y and z-directions and saving the subset system into a new .gro file (smaller box and subset of molecules) For example: from original box 10x10x10 nm3 write coordin