Re: [gmx-users] Simulation of Primed DNA-rtp entry and Terminal residue

2011-07-06 Thread Justin A. Lemkul
Please do not reply to the entire digest; the archive is horribly confusing as it is. Let's not make it worse. Cut and paste any relevant text for your reply and delete the extraneous stuff. Singh wrote: Hi Justin, Thanks for quick response :) Basically I don't want terminal H atom.. in

[gmx-users] Simulation of Primed DNA-rtp entry and Terminal residue

2011-07-06 Thread Singh
Hi Justin, Thanks for quick response :) Basically I don't want terminal H atom.. instead of that I want O+ at 3' end and -CH2-O-PO3 at second. but it is appearing on both the ends... :( Any suggestions? Raghav Research Scholar IEMN, University of Science and Technology Villeneuve d'ascq, Li