Re: [gmx-users] Restarting the job

2010-08-12 Thread sonali dhindwal
Thanks Mark. -- Sonali Dhindwal --- On Fri, 13/8/10, Mark Abraham wrote: From: Mark Abraham Subject: Re: [gmx-users] Restarting the job To: "Discussion list for GROMACS users" Date: Friday, 13 August, 2010, 8:46 AM - Original Message - From: sonali dhindwal Date: Friday,

Re: [gmx-users] Restarting the job

2010-08-12 Thread Mark Abraham
- Original Message - From: sonali dhindwal Date: Friday, August 13, 2010 0:59 Subject: [gmx-users] Restarting the job To: Discussion list for GROMACS users --- | --- | > He

[gmx-users] Restarting the job

2010-08-12 Thread sonali dhindwal
Hello All, I have a query regarding the restarts of the jobs after crash. I want to simulate a protein for 2 ns but in between due to system shutdown, it stopped, and I made a restart using this command: mdrun -s topol.tpr -cpi state.cpt -appendnow I checked the rmsd of in between by producing a