Re: [gmx-users] Re:Re: g_spatial and vmd volume slice

2009-02-17 Thread XAvier Periole
1. My solute molecule is planar molecule. When I load my *.cube file to VMD, the solute molecule is not perpendicular to any axis. your question is not clear! You may reorient your solute prior giving it to VMD. Some gmx tools allow to do this. you could fit to a reference structure that i

[gmx-users] Re:Re: g_spatial and vmd volume slice

2009-02-17 Thread Jinyao Wang
Dear chris, Thank you for you help. I have solved my problem. If I use VMD at XP system,the volumeslice is displayed. I am apologized it that I still have some difficulties to bother you. 1. My solute molecule is planar molecule. When I load my *.cube file to VMD, the solute molecule is no