Re: [gmx-users] Re: invalid line (coordinates)

sarah k wrote: dear Justin, The link of (http://www.gromacs.org/Documentation/Errors#Number_of_coordinates_in_coordinate_file_does_not_match_topology) helped but still I have problem. There are 35344SOL molecules in my _solv.gro file. the last atom is N2 72342. The last part of my topol.top

[gmx-users] Re: invalid line (coordinates)

dear Justin, The link of (http://www.gromacs.org/Documentation/Errors#Number_of_coordinates_in_coordinate_file_does_not_match_topology) helped but still I have problem. There are 35344SOL molecules in my _solv.gro file. the last atom is N2 72342. The last part of my topol.top file is: [molecules

Re: [gmx-users] Re: invalid line

sarah k wrote: dear Justin A. Lemkul, thanks for your reply. You were right. Now, it works and generates the nitrogen box. But when I type: grompp_d -f ions.mdp -c 3INC_solv.gro -p topol.top -o ions.tpr I recieve this error: source file: grompp.c, line: 362 number of coordinates in coordinate

[gmx-users] Re: invalid line

dear Justin A. Lemkul, thanks for your reply. You were right. Now, it works and generates the nitrogen box. But when I type: grompp_d -f ions.mdp -c 3INC_solv.gro -p topol.top -o ions.tpr I recieve this error: source file: grompp.c, line: 362 number of coordinates in coordinate file (3INC_solv.gr