: Montag, 25. März 2013 um 16:56 Uhr
Von: "Anna MARABOTTI"
An: gmx-users@gromacs.org
Betreff: [gmx-users] Re: Re: help with chromophore of a GFP
Dear gmx-users,
I'm still dealing with my problem of obtaining
parameters for my chromophore of the GFP family, in order to treat it a
On Mon, Mar 25, 2013 at 4:56 PM, Anna MARABOTTI wrote:
>
>
> Dear gmx-users,
>
> I'm still dealing with my problem of obtaining
> parameters for my chromophore of the GFP family, in order to treat it as
> a new residue. I'm trying (VERY hardly) to add missing parameters into
> ffbonded.itp file f
Dear gmx-users,
I'm still dealing with my problem of obtaining
parameters for my chromophore of the GFP family, in order to treat it as
a new residue. I'm trying (VERY hardly) to add missing parameters into
ffbonded.itp file for AMBER99SB ff, using those parameters found in
files calculated by
On Fri, Mar 22, 2013 at 2:36 PM, Anna MARABOTTI wrote:
>
> Dear Mark, Justin and other gmx-users,
> thank you very much for your
> help. Thanks to your suggestions, I made some steps forward, but still I
> don't see the end of my travel...
>
> First of all, I would like to say
> that my previou
Dear Mark, Justin and other gmx-users,
thank you very much for your
help. Thanks to your suggestions, I made some steps forward, but still I
don't see the end of my travel...
First of all, I would like to say
that my previous problem was solved when I renamed O1 to OA. Justin was
right. When I
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