On 10/30/12 3:28 AM, Bharath K. Srikanth wrote:
Hi Chris
My EM works just fine if I use a cubical box of water, so I'm baffled as
to what's going wrong in this case.
I tried the entire process again, this time removing position restraints.
Let me describe my entire procedure on this occasion,
Hi Chris
My EM works just fine if I use a cubical box of water, so I'm baffled as
to what's going wrong in this case.
I tried the entire process again, this time removing position restraints.
Let me describe my entire procedure on this occasion, once again:
1) I first assembled a bilayer of 128
Hi Chris,
You're right, my resizing from 7.5 nm to 15 nm refers to the dimension
normal to the lipid bilayer (in this case, the x dimension)
My bilayer center of mass is at around +3 nm, and I placed the CNP at
around 10 nm to start with. I had periodic boundary conditions employed in
all three d
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