Also check out "make_ndx -help". Omer.
Koby Levy research group,
Weizmann Institute of Science.
http://www.weizmann.ac.il/sb/faculty_pages/Levy/
On Mon, Jan 19, 2009 at 18:28, Vitaly Chaban wrote:
> > I am running a simulation of 5 time steps and am trying to avoid
> setting
> > nstxtcout
> I am running a simulation of 5 time steps and am trying to avoid setting
> nstxtcout = 1 or nstxout = 1. The file size becomes unmanageable if I set
> either of these two parameters to 1. I do not need the coordinates for all
> atoms in the system, just the alpha carbons, which are grouped
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