Re: [gmx-users] R: neighborsearching error

2009-02-17 Thread Justin A. Lemkul
Anna Marabotti wrote: Dear Justin, many thanks for your answer. The removal of problematic water was just a "desperate" trial I made to find a solution to this problem. During my attempts, I changed: - the box size (for this particular system, I use a cubic box of 0.9 nm per side: I enlarged

[gmx-users] R: neighborsearching error

2009-02-17 Thread Anna Marabotti
Dear Justin, many thanks for your answer. The removal of problematic water was just a "desperate" trial I made to find a solution to this problem. During my attempts, I changed: - the box size (for this particular system, I use a cubic box of 0.9 nm per side: I enlarged it until 1 nm, but nothin

Re: [gmx-users] R: neighborsearching error

2009-02-17 Thread Justin A. Lemkul
Anna Marabotti wrote: I'm resending the message without attachments, since the previous one was filtered because it was too big. Please let me know how to send infos without being filtered, if more information are needed to help me. I tried again and again, changing settings and options for m

[gmx-users] R: neighborsearching error

2009-02-17 Thread Anna Marabotti
I'm resending the message without attachments, since the previous one was filtered because it was too big. Please let me know how to send infos without being filtered, if more information are needed to help me. I tried again and again, changing settings and options for minimization, but I had no