Re: [gmx-users] Problem with trjconv and centering bilayer.

2012-01-16 Thread Justin A. Lemkul
Ioannis Beis wrote: Dear gromacs users, I am trying to center the trajectory of a bilayer in the rectangular simulation box in the frame of my effort to calculate the bilayer thickness with g_dist. According to the visualization, the upper layer of the membrane lies on the lowest part of th

[gmx-users] Problem with trjconv and centering bilayer.

2012-01-16 Thread Ioannis Beis
Dear gromacs users, I am trying to center the trajectory of a bilayer in the rectangular simulation box in the frame of my effort to calculate the bilayer thickness with g_dist. According to the visualization, the upper layer of the membrane lies on the lowest part of the box and the lower