Re: [gmx-users] Ligand during GPRC-membrane simulation

2009-10-19 Thread Justin A. Lemkul
Thielges, Sabine wrote: Hi everyone, I am currently doing a simulation which involves a dopamine receptor placed in a POPC membrane and an agonist or antagonist in the active site. The ligand was placed by VS and is closed to what the biology gives. My problem is that the ligand get out of is

[gmx-users] Ligand during GPRC-membrane simulation

2009-10-19 Thread Thielges, Sabine
Hi everyone, I am currently doing a simulation which involves a dopamine receptor placed in a POPC membrane and an agonist or antagonist in the active site. The ligand was placed by VS and is closed to what the biology gives. My problem is that the ligand get out of is normal position during the s