Re: [gmx-users] Large VCM error for a POPC bilayer simulation : 2nd attempt

2007-10-17 Thread himanshu khandelia
Hi, Thanks for the help. I did not know about this function. However, genconf seems to be another way of building the system from scratch all over again. (step 1 of my previous email). I think I have a fairly reasonable system before starting dynamics, although the replication of the 128-lipid as

Re: [gmx-users] Large VCM error for a POPC bilayer simulation : 2nd attempt

2007-10-17 Thread Rainer Böckmann
Hi, genconf -nbox 2 2 1 will help you. Best, rainer himanshu khandelia wrote: Hi, My message did not go through properly to the mailing list (only the attachment went through). Here is a repeat attempt: ## Hi Folks, I was trying to make a large POPC system from Tieleman's 128 lipi