Re: [gmx-users] Kindly read this one, Apologies for the previous mail.

2006-08-12 Thread Pedro Alexandre Lapido Loureiro
how about the ref_p value? will that be 1 only? or 0 1 the way I had specified in my previous mail? regards, pri... Sorry, I forgot that! No, it will be 2 values. Of course, the first value is unimportant, as long as you have set the x/y compressibilty to zero. Pedro. ---

Re: [gmx-users] Kindly read this one, Apologies for the previous mail.

2006-08-12 Thread priyanka srivastava
thank you so much for a prompt reply. how about the ref_p value? will that be 1 only? or 0 1 the way I had specified in my previous mail? regards, pri... --- Pedro Alexandre Lapido Loureiro <[EMAIL PROTECTED]> wrote: > > > > compressibility = 0 0 0 0 0 0 ; off diagonals are > zero > > > >

Re: [gmx-users] Kindly read this one, Apologies for the previous mail.

2006-08-12 Thread Pedro Alexandre Lapido Loureiro
compressibility = 0 0 0 0 0 0 ; off diagonals are zero too!(hence 6 values, as suggested by Erick Lindahl on one of the replies) ref_p = 0 1 pcoupltype = semiisotropic

[gmx-users] Kindly read this one, Apologies for the previous mail.

2006-08-12 Thread priyanka srivastava
Dear All, I want to do a lipid simulation using NPAT ensemble. This is how I am defining the .mdp file. I am not sure of these values though, kindly correct me if I am doing something wrong. compressibility = 0 0 0 0 0 0 ; off diagonals are zero too!(hence 6 value