On Friday, May 29, 2009 9:38:00 AM, vivek sharma
wrote:
> Thanks a lot for your quick response. It is really encouraging to get
> response from developers like you.
>
> I tried generating topology again with the same command line and corrected
> input file.This time I am
> getting error a
Hi Bruce,
I was trying to generate topologies for one ligand using topolbuild. For the
same I used the command "*topolbuild -dir
/home/vivek/topolbuild1_2_1/dat/gromacs/ -ff gmx43a1 -n Bromo-WR99210 -r
RESID*"
and it resulted in an error as follow:
*Fatal error.
Source code file: readmol2.c, li
Apparently some versions of make do not handle my make files the same way that
the version of make I use does. The attached Makefile might help in such cases.
Sincerely,
--
Bruce D. Ray, Ph.D.
Associate Scientist, and Operations Director
NMR Center
IUPUI
Physics Dept.
402 N. Blackford St.
Ind
From: vivek sharma
To: Discussion list for GROMACS users
Sent:
Subject: Re: [gmx-users] Installing topolbuild
On Friday, March 6, 2009 2:29:32 AM,
vivek sharma wrote:
> Thanks for your reply. I am workin on RHEL with architecture x86_64.
> when i se
Hi Bruce,
Thanks for your reply. I am workin on RHEL with architecture x86_64. when i
searched for libm.* I got a few location, I tried "make: again after
exporting these location in LD_LIBRARY_PATH. but i am getting the same error
again. I think, i didn't downloaded the appropriate files for insta
On Thursday, March 5, 2009 1:47:28 AM,
vivek sharma wrote:
> I am trying to Install topolbuild on my system, while doing so with
> the make file given in the topolbuild folder. but I end up with a list
> of error mentioned below:
> ..
> .
> .
> .
> .compare_FF.c:(.text+0x1285): undefined re
Hi There,
I am trying to Install topolbuild on my system, while doing so with the make
file given in the topolbuild folder.
but I end up with a list of error mentioned below:
..
.
.
.
.compare_FF.c:(.text+0x1285): undefined reference to `exp'
compare_FF.c:(.text+0x12cc): undefined reference to
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