Re: [gmx-users] Generating topology with pdb2gmx

Moeed wrote: Dear Justin, 1- Unfortunately, I am having difficulty running the simple program pdb2gmx with pdb file you sent me for Hexane.. I have in working directory pdb file and rtp files: Hexane-PRODRG.pdb rtp.pdb pdb2gmx -f Hexane-PRODRG.pdb -o Hexane.gro -p Hexane.top >& output.pd

[gmx-users] Generating topology with pdb2gmx

Dear Justin, 1- Unfortunately, I am having difficulty running the simple program pdb2gmx with pdb file you sent me for Hexane.. I have in working directory pdb file and rtp files: Hexane-PRODRG.pdb rtp.pdb pdb2gmx -f Hexane-PRODRG.pdb -o Hexane.gro -p Hexane.top >& output.pdb2gmx output.pdb2gmx